PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GH2K1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 202aa    MW: 23038.4 Da    PI: 8.5076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GH2K1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.18.9e-101666455
                 HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                   +++Er+RR+++++  ++L +llP+ +   p++  +  ++   +A+ YIk L+
  Aradu.GH2K1 16 ERKIIERNRREQMKNLCFKLNSLLPNfN---PKQTlPPRVDQIDEAIIYIKTLE 66
                 6789**********************88...77777***************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.94E-51070No hitNo description
SuperFamilySSF474595.76E-111282IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.8081265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-91480IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.2E-71666IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00241871IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MAHQQRGQAS SSTKMERKII ERNRREQMKN LCFKLNSLLP NFNPKQTLPP RVDQIDEAII  60
YIKTLESRVE IAKEKKESLL NKGMKKRPHD LAGSSAFDDE TQGTSLKPPT IEIHERGSML  120
EIVLMISGFD NQFIFSEIIR ILHEENIEVL SAISSRAGDS MIHVVHAENH LYQLGATKEI  180
SERLKRFVDA HRLQDIQGAQ GP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936175.13e-84PREDICTED: uncharacterized protein LOC107462123
TrEMBLK7KY291e-61K7KY29_SOYBN; Uncharacterized protein
STRINGGLYMA06G44660.24e-61(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-27bHLH family protein